EnhancerDB
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  3. rs564364200[chr6:11258050]
Enhancers that have rs564364200[chr6:11258050]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11250905 11281835 enh23019
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs564364200[chr6:11258050]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11258049 11258063 TCF7L2 JASPAR yes 99869521
chr6 11258049 11258064 LEF1 JASPAR yes 99869522
chr6 11258050 11258064 NR2F1 JASPAR yes 99869523
chr6 11258050 11258064 RXRG JASPAR yes 99869524
Genes associated with rs564364200[chr6:11258050], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More