EnhancerDB
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  3. rs564372866[chr17:29821666]
Enhancers that have rs564372866[chr17:29821666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29816091 29829595 enh4360
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs564372866[chr17:29821666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29821218 29821738 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750099
chr17 29821218 29821738 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249435
chr17 29821314 29821750 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750105
chr17 29821314 29821750 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249443
chr17 29821318 29821754 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750106
chr17 29821318 29821754 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249444
chr17 29821332 29821688 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750107
chr17 29821332 29821688 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249445
chr17 29821342 29821682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750109
chr17 29821342 29821682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249447
chr17 29821417 29821693 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750113
chr17 29821417 29821693 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249451
chr17 29821647 29821668 IRF1 JASPAR yes 53842432
chr17 29821656 29821667 PROP1 JASPAR yes 53842435
chr17 29821665 29821671 TBP TRANSFAC yes 53842436
chr17 29821666 29821687 IRF1 JASPAR yes 53842437
Genes associated with rs564372866[chr17:29821666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More