EnhancerDB
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  3. rs564400518[chr6:25027485]
Enhancers that have rs564400518[chr6:25027485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
chr6 25027478 25027700 vista51364
VISTA
Transcript factors that have rs564400518[chr6:25027485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25027371 25027795 CTCF UCSC Txn Factor no Conserved 108539108
chr6 25027446 25027710 RAD21 UCSC Txn Factor no Conserved 108539109
chr6 25027447 25027717 SMC3 UCSC Txn Factor no Conserved 108539110
chr6 25027481 25027487 TCF4 TRANSFAC yes 70336185
chr6 25027481 25027487 TCF4 TRANSFAC yes 100815675
Genes associated with rs564400518[chr6:25027485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More