EnhancerDB
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  3. rs564421387[chr1:40357002]
Enhancers that have rs564421387[chr1:40357002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40355693 40361095 enh11768
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs564421387[chr1:40357002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40356986 40357007 IRF1 JASPAR yes 28299381
chr1 40356987 40357002 FOXP1 JASPAR yes 28299382
chr1 40356988 40357003 FOXP1 JASPAR yes 28299383
chr1 40356989 40357004 FOXP1 JASPAR yes 28299384
chr1 40356990 40357005 FOXP1 JASPAR yes 28299385
Genes associated with rs564421387[chr1:40357002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More