EnhancerDB
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  3. rs564455593[chr18:55458582]
Enhancers that have rs564455593[chr18:55458582]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564455593[chr18:55458582]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55458561 55458582 IRF1 JASPAR yes 110886632
chr18 55458562 55458583 IRF1 JASPAR yes 110886634
chr18 55458563 55458584 IRF1 JASPAR yes 110886635
chr18 55458567 55458588 IRF1 JASPAR yes 110886636
chr18 55458568 55458583 FOXP1 JASPAR yes 110886637
chr18 55458568 55458589 IRF1 JASPAR yes 110886638
chr18 55458569 55458584 STAT2 JASPAR yes 110886639
chr18 55458572 55458593 IRF1 JASPAR yes 110886640
chr18 55458573 55458588 FOXP1 JASPAR yes 110886641
chr18 55458573 55458594 IRF1 JASPAR yes 110886642
chr18 55458577 55458598 IRF1 JASPAR yes 110886643
chr18 55458578 55458593 FOXP1 JASPAR yes 110886644
chr18 55458578 55458599 IRF1 JASPAR yes 110886645
chr18 55458579 55458600 IRF1 JASPAR yes 110886646
chr18 55458580 55458595 FOXP1 JASPAR yes 110886647
chr18 55458580 55458601 IRF1 JASPAR yes 110886648
chr18 55458582 55458597 FOXP1 JASPAR yes 110886649
Genes associated with rs564455593[chr18:55458582], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More