EnhancerDB
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  3. rs564456530[chr1:212085521]
Enhancers that have rs564456530[chr1:212085521]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs564456530[chr1:212085521]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212085383 212085779 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21377473
chr1 212085413 212085753 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21377474
chr1 212085446 212085950 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21377475
chr1 212085456 212085952 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21377476
chr1 212085461 212085791 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21377477
chr1 212085476 212085796 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21377478
chr1 212085480 212085760 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21377479
chr1 212085503 212085521 SRF JASPAR yes 35090400
chr1 212085505 212085761 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21377480
chr1 212085513 212085523 TEAD1 JASPAR yes 35090406
chr1 212085513 212085523 TEAD4 JASPAR yes 35090407
chr1 212085514 212085522 TEAD3 JASPAR yes 35090408
Genes associated with rs564456530[chr1:212085521], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More