EnhancerDB
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  3. rs564508949[chr17:65434199]
Enhancers that have rs564508949[chr17:65434199]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs564508949[chr17:65434199]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65434183 65434204 IRF1 JASPAR yes 55504008
chr17 65434185 65434200 FOXP1 JASPAR yes 55504009
chr17 65434185 65434206 IRF1 JASPAR yes 55504010
chr17 65434186 65434201 FOXP1 JASPAR yes 55504011
chr17 65434187 65434208 IRF1 JASPAR yes 55504012
chr17 65434188 65434203 FOXP1 JASPAR yes 55504013
chr17 65434189 65434210 IRF1 JASPAR yes 55504014
chr17 65434193 65434208 FOXP1 JASPAR yes 55504015
chr17 65434193 65434214 IRF1 JASPAR yes 55504016
chr17 65434194 65434209 FOXP1 JASPAR yes 55504017
chr17 65434195 65434216 ZNF263 JASPAR yes 55504018
chr17 65434196 65434217 IRF1 JASPAR yes 55504019
Genes associated with rs564508949[chr17:65434199], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More