EnhancerDB
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  3. rs564540611[chr1:205289479]
Enhancers that have rs564540611[chr1:205289479]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs564540611[chr1:205289479]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205289473 205289482 SP1 TRANSFAC yes 34754846
chr1 205289474 205289482 SP1 TRANSFAC yes 34754847
chr1 205289474 205289484 SP1 JASPAR yes 34754848
Genes associated with rs564540611[chr1:205289479], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More