EnhancerDB
  1. Home
  2. SNP
  3. rs564551410[chr17:1901566]
Enhancers that have rs564551410[chr17:1901566]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564551410[chr17:1901566]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1901566 1901578 TFAP2A JASPAR yes 52714775
chr17 1901566 1901578 TFAP2B JASPAR yes 52714776
chr17 1901566 1901578 TFAP2C JASPAR yes 52714777
chr17 1901566 1901580 PLAG1 JASPAR yes 52714778
Genes associated with rs564551410[chr17:1901566], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More