EnhancerDB
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  3. rs564615806[chr1:204272004]
Enhancers that have rs564615806[chr1:204272004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564615806[chr1:204272004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204271998 204272019 IRF1 JASPAR yes 34690606
chr1 204272002 204272023 IRF1 JASPAR yes 34690607
chr1 204272003 204272018 FOXP1 JASPAR yes 34690608
chr1 204272004 204272025 IRF1 JASPAR yes 34690609
Genes associated with rs564615806[chr1:204272004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More