EnhancerDB
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  3. rs564617295[chr19:6089320]
Enhancers that have rs564617295[chr19:6089320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564617295[chr19:6089320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6086509 6089323 ZNF274 GTRD no Blood (GM12878) 108376894
chr19 6086701 6089372 TCF7L2 GTRD no Colon (HCT116) 21844430
chr19 6086701 6089372 TCF7L2 GTRD no Colon (HCT116) 108376899
chr19 6086790 6089425 ZNF274 GTRD no Blood (GM12878) 108376902
chr19 6089302 6089323 ZNF263 JASPAR yes 112255659
Genes associated with rs564617295[chr19:6089320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More