EnhancerDB
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  3. rs564621290[chr17:57449328]
Enhancers that have rs564621290[chr17:57449328]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57433402 57461748 enh17258
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs564621290[chr17:57449328]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 21774797
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 108275852
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 108275853
chr17 57449319 57449330 FLI1 JASPAR yes 55053737
chr17 57449320 57449330 GABPA JASPAR yes 55053738
chr17 57449320 57449333 ELF1 JASPAR yes 55053739
chr17 57449325 57449333 MEIS3 JASPAR yes 55053740
chr17 57449326 57449330 NFE TRANSFAC yes 55053741
Genes associated with rs564621290[chr17:57449328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More