EnhancerDB
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  3. rs564626422[chr1:178614384]
Enhancers that have rs564626422[chr1:178614384]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs564626422[chr1:178614384]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178614181 178614846 ZNF274 GTRD no Liver (HepG2) 21352775
chr1 178614315 178614751 ZNF274 GTRD no Liver (HepG2) 21352776
chr1 178614322 178614789 ZNF143 GTRD no Epithelial (MCF-7) 21352777
chr1 178614325 178614829 ZNF143 GTRD no Epithelial (MCF-7) 21352778
chr1 178614332 178614701 ZNF274 GTRD no Liver (HepG2) 21352779
chr1 178614356 178614770 ZNF274 GTRD no Liver (HepG2) 21352780
chr1 178614372 178614393 IRF1 JASPAR yes 33432603
Genes associated with rs564626422[chr1:178614384], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More