EnhancerDB
  1. Home
  2. SNP
  3. rs564654858[chr1:40517552]
Enhancers that have rs564654858[chr1:40517552]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40502505 40522915 enh266
Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Uterus Blood (Karpas-422) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs564654858[chr1:40517552]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40517537 40517552 FOXP1 JASPAR yes 28313180
chr1 40517539 40517554 FOXP1 JASPAR yes 28313182
chr1 40517540 40517560 RREB1 JASPAR yes 28313183
chr1 40517540 40517561 IRF1 JASPAR yes 28313184
chr1 40517542 40517557 FOXP1 JASPAR yes 28313185
chr1 40517545 40517565 RREB1 JASPAR yes 28313186
chr1 40517546 40517567 IRF1 JASPAR yes 28313187
chr1 40517547 40517553 TCF4 TRANSFAC yes 28313188
chr1 40517547 40517562 FOXP1 JASPAR yes 28313189
chr1 40517550 40517562 IRF1 JASPAR yes 28313190
chr1 40517551 40517572 IRF1 JASPAR yes 28313191
chr1 40517552 40517558 TCF4 TRANSFAC yes 28313192
chr1 40517552 40517567 FOXP1 JASPAR yes 28313193
Genes associated with rs564654858[chr1:40517552], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More