EnhancerDB
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  3. rs564674777[chr1:54782461]
Enhancers that have rs564674777[chr1:54782461]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs564674777[chr1:54782461]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54782456 54782467 FOXB1 JASPAR yes 28972709
chr1 54782456 54782467 FOXC1 JASPAR yes 28972710
chr1 54782456 54782468 FOXC2 JASPAR yes 28972711
chr1 54782456 54782468 MEF2A JASPAR yes 28972712
chr1 54782456 54782468 MEF2D JASPAR yes 28972713
chr1 54782457 54782467 MEF2A JASPAR yes 28972714
chr1 54782458 54782462 TEAD2 TRANSFAC yes 28972715
chr1 54782458 54782463 TBP TRANSFAC yes 28972716
chr1 54782458 54782464 TMF TRANSFAC yes 28972717
Genes associated with rs564674777[chr1:54782461], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More