EnhancerDB
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  3. rs564738874[chr6:43088794]
Enhancers that have rs564738874[chr6:43088794]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43086525 43096385 enh23251
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs564738874[chr6:43088794]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43088782 43088803 IRF1 JASPAR yes 101756690
chr6 43088784 43088799 STAT2 JASPAR yes 101756691
chr6 43088785 43088799 STAT1 JASPAR yes 101756692
chr6 43088786 43088801 IRF9 JASPAR yes 101756693
chr6 43088788 43088809 IRF1 JASPAR yes 101756694
chr6 43088789 43088804 FOXP1 JASPAR yes 101756695
chr6 43088789 43088810 IRF1 JASPAR yes 101756696
chr6 43088790 43088801 FOXP2 JASPAR yes 101756697
chr6 43088790 43088805 STAT2 JASPAR yes 101756698
chr6 43088790 43088811 IRF1 JASPAR yes 101756699
chr6 43088791 43088806 FOXP1 JASPAR yes 101756700
chr6 43088791 43088812 IRF1 JASPAR yes 101756701
chr6 43088792 43088813 IRF1 JASPAR yes 101756702
chr6 43088793 43088808 FOXP1 JASPAR yes 101756703
chr6 43088793 43088814 IRF1 JASPAR yes 101756704
chr6 43088794 43088809 FOXP1 JASPAR yes 101756705
chr6 43088794 43088815 IRF1 JASPAR yes 101756706
Genes associated with rs564738874[chr6:43088794], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More