EnhancerDB
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  3. rs564775499[chr16:87875740]
Enhancers that have rs564775499[chr16:87875740]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs564775499[chr16:87875740]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87874693 87875946 ZNF274 GTRD no Bone Marrow (K562) 21735127
chr16 87874693 87875946 ZNF274 GTRD no Bone Marrow (K562) 108221181
chr16 87874977 87875775 ZNF274 GTRD no Bone Marrow (K562) 21735146
chr16 87874977 87875775 ZNF274 GTRD no Bone Marrow (K562) 108221201
chr16 87875531 87875902 TCF7L2 GTRD no Colon (HCT116) 21735181
chr16 87875531 87875902 TCF7L2 GTRD no Colon (HCT116) 108221238
chr16 87875730 87875740 LEF1 TRANSFAC yes 12245843
Genes associated with rs564775499[chr16:87875740], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More