EnhancerDB
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  3. rs564808820[chr1:209590119]
Enhancers that have rs564808820[chr1:209590119]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 209590107 209590333 vista4901
VISTA
Transcript factors that have rs564808820[chr1:209590119]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209590059 209591032 ZBTB33 GTRD no Lung (A549) 21375373
chr1 209590059 209591032 ZBTB33 GTRD no Lung (A549) 107865768
chr1 209590088 209591055 AR GTRD no Prostate (PC-3) 21375374
chr1 209590088 209591055 AR GTRD no Prostate (PC-3) 107865769
chr1 209590117 209590121 NFE TRANSFAC yes 34973871
chr1 209590117 209590121 NFE TRANSFAC yes 118448317
chr1 209590119 209590129 MAX JASPAR yes 34973872
chr1 209590119 209590129 MAX JASPAR yes 118448318
Genes associated with rs564808820[chr1:209590119], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More