EnhancerDB
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  3. rs564826117[chr1:54762806]
Enhancers that have rs564826117[chr1:54762806]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs564826117[chr1:54762806]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54762789 54762809 RREB1 JASPAR yes 28970042
chr1 54762793 54762813 RREB1 JASPAR yes 28970045
chr1 54762794 54762808 GLIS3 JASPAR yes 28970046
chr1 54762796 54762816 RREB1 JASPAR yes 28970047
chr1 54762806 54762825 CTCF JASPAR yes 28970048
Genes associated with rs564826117[chr1:54762806], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More