EnhancerDB
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  3. rs564995861[chr16:87819414]
Enhancers that have rs564995861[chr16:87819414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs564995861[chr16:87819414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87819271 87820363 TCF7L2 GTRD no Colon (HCT116) 21734478
chr16 87819299 87820474 ZNF143 GTRD no Epithelial (MCF-7) 21734479
chr16 87819316 87820447 TCF7L2 GTRD no Colon (HCT116) 21734480
chr16 87819368 87820352 TCF7L2 GTRD no Colon (HCT116) 21734481
chr16 87819403 87819423 TP53 JASPAR yes 12239201
chr16 87819407 87819423 T JASPAR yes 12239202
chr16 87819411 87819423 HES5 JASPAR yes 12239203
chr16 87819411 87819423 HES7 JASPAR yes 12239204
chr16 87819411 87819423 PKNOX2 JASPAR yes 12239205
chr16 87819411 87819431 TP63 JASPAR yes 12239206
chr16 87819412 87819430 TP73 JASPAR yes 12239207
Genes associated with rs564995861[chr16:87819414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More