EnhancerDB
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  3. rs565055825[chr3:56878000]
Enhancers that have rs565055825[chr3:56878000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56877665 56906735 enh35421
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Lung (PC-9) Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs565055825[chr3:56878000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56877995 56878005 POU6F2 JASPAR yes 2602296
chr3 56877996 56878006 GSX1 JASPAR yes 2602297
chr3 56877996 56878006 GSX2 JASPAR yes 2602298
chr3 56877996 56878006 HOXB3 JASPAR yes 2602299
chr3 56877996 56878007 HOXC13 JASPAR yes 2602300
chr3 56877996 56878007 HOXD12 JASPAR yes 2602301
chr3 56877997 56878005 NKX6-1 JASPAR yes 2602302
chr3 56877997 56878005 NKX6-2 JASPAR yes 2602303
chr3 56877997 56878007 HOXC10 JASPAR yes 2602304
chr3 56877997 56878007 HOXD13 JASPAR yes 2602305
chr3 56877997 56878013 POU4F2 JASPAR yes 2602306
chr3 56877999 56878003 YY1 TRANSFAC yes 2602307
Genes associated with rs565055825[chr3:56878000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More