EnhancerDB
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  3. rs565073652[chr1:232760486]
Enhancers that have rs565073652[chr1:232760486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs565073652[chr1:232760486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232760483 232760498 HNF4G JASPAR yes 36178784
chr1 232760483 232760498 NR2C2 JASPAR yes 36178785
chr1 232760484 232760498 NR2F1 JASPAR yes 36178786
chr1 232760484 232760499 HNF4A JASPAR yes 36178787
chr1 232760486 232760490 LFA1 TRANSFAC yes 36178788
Genes associated with rs565073652[chr1:232760486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More