EnhancerDB
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  3. rs565172619[chr1:229231219]
Enhancers that have rs565172619[chr1:229231219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs565172619[chr1:229231219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 21389897
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 107877686
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 21389898
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 107877687
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 21389900
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 107877689
chr1 229228830 229232022 ZBTB33 GTRD no Lung (A549) 107877691
chr1 229228877 229232149 ZBTB33 GTRD no Lung (A549) 107877698
chr1 229228881 229232191 ZBTB33 GTRD no Lung (A549) 107877700
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 21389909
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 107877703
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 21389915
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 107877710
chr1 229230243 229231728 ZNF143 GTRD no Epithelial (MCF-7) 21389946
chr1 229230279 229231743 ZNF143 GTRD no Epithelial (MCF-7) 21389950
chr1 229230300 229231826 ZNF143 GTRD no Epithelial (MCF-7) 21389951
chr1 229230315 229231963 ZNF143 GTRD no Epithelial (MCF-7) 21389954
chr1 229230336 229231805 ZNF143 GTRD no Epithelial (MCF-7) 21389955
chr1 229230348 229231906 ZNF274 GTRD no Cervix (HeLa-S3) 21389956
chr1 229230355 229231922 ZNF143 GTRD no Epithelial (MCF-7) 21389957
chr1 229230412 229232073 ZNF274 GTRD no Cervix (HeLa-S3) 21389958
chr1 229230494 229231580 ZNF274 GTRD no Cervix (HeLa-S3) 21389966
chr1 229230707 229231237 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389988
chr1 229230717 229231233 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389989
chr1 229231034 229231729 ZNF143 GTRD no Epithelial (MCF-7) 21389995
chr1 229231034 229231814 ZNF274 GTRD no Cervix (HeLa-S3) 21389996
chr1 229231054 229231733 ZNF143 GTRD no Epithelial (MCF-7) 21389997
chr1 229231172 229231588 ZNF143 GTRD no Epithelial (MCF-7) 21389998
chr1 229231181 229231983 ZNF274 GTRD no Cervix (HeLa-S3) 21389999
chr1 229231184 229231955 ZNF274 GTRD no Cervix (HeLa-S3) 21390000
chr1 229231199 229231220 IRF1 JASPAR yes 35959604
chr1 229231205 229231226 IRF1 JASPAR yes 35959607
chr1 229231213 229231234 IRF1 JASPAR yes 35959608
chr1 229231214 229231220 SOX10 JASPAR yes 35959609
chr1 229231215 229231236 IRF1 JASPAR yes 35959610
chr1 229231219 229231240 IRF1 JASPAR yes 35959611
Genes associated with rs565172619[chr1:229231219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More