EnhancerDB
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  3. rs565221878[chr1:208360424]
Enhancers that have rs565221878[chr1:208360424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208343485 208368555 enh12612
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs565221878[chr1:208360424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208360413 208360429 SOX8 JASPAR yes 34904941
chr1 208360420 208360436 SOX8 JASPAR yes 34904942
chr1 208360420 208360441 IRF1 JASPAR yes 34904943
chr1 208360422 208360426 YY1 TRANSFAC yes 34904944
chr1 208360424 208360436 IRF1 JASPAR yes 34904945
chr1 208360424 208360438 IRF7 JASPAR yes 34904946
chr1 208360424 208360439 IRF9 JASPAR yes 34904947
Genes associated with rs565221878[chr1:208360424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More