EnhancerDB
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  3. rs565233434[chr16:87901779]
Enhancers that have rs565233434[chr16:87901779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
chr16 87901718 87902209 vista23464
VISTA
Transcript factors that have rs565233434[chr16:87901779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87901561 87902230 TCF7L2 GTRD no Colon (HCT116) 21735381
chr16 87901561 87902230 TCF7L2 GTRD no Colon (HCT116) 108221460
chr16 87901633 87902217 TCF7L2 GTRD no Colon (HCT116) 21735382
chr16 87901633 87902217 TCF7L2 GTRD no Colon (HCT116) 108221461
chr16 87901647 87902243 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21735383
chr16 87901647 87902243 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108221462
chr16 87901702 87901871 TCF7L2 GTRD no Colon (HCT116) 21735384
chr16 87901702 87901871 TCF7L2 GTRD no Colon (HCT116) 108221463
chr16 87901719 87902188 ZNF143 GTRD no Epithelial (MCF-7) 108221464
chr16 87901761 87903498 POLR2A UCSC Txn Factor no Conserved 108221465
chr16 87901773 87902138 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735385
chr16 87901773 87902138 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221466
Genes associated with rs565233434[chr16:87901779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More