EnhancerDB
  1. Home
  2. SNP
  3. rs565239901[chr19:13953537]
Enhancers that have rs565239901[chr19:13953537]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565239901[chr19:13953537]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390133
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390134
chr19 13949228 13953924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851739
chr19 13949337 13954090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851742
chr19 13951579 13953680 TCF7L2 GTRD no Colon (HCT116) 21851877
chr19 13951635 13954235 ZNF274 GTRD no Blood (GM12878) 21851886
chr19 13951637 13953815 ZNF274 GTRD no Bone Marrow (K562) 21851887
chr19 13951640 13953891 ZNF274 GTRD no Cervix (HeLa-S3) 21851889
chr19 13951646 13953826 ZNF274 GTRD no Bone Marrow (K562) 21851890
chr19 13951772 13953797 ZNF274 GTRD no Bone Marrow (K562) 21851910
chr19 13951794 13953699 ZNF274 GTRD no Bone Marrow (K562) 21851921
chr19 13951823 13953780 ZNF274 GTRD no Bone Marrow (K562) 21851929
chr19 13951838 13954705 TCF7L2 GTRD no Colon (HCT116) 21851938
chr19 13951838 13954705 TCF7L2 GTRD no Colon (HCT116) 108390135
chr19 13951854 13953700 TCF7L2 GTRD no Colon (HCT116) 21851944
chr19 13951887 13954603 TCF7L2 GTRD no Colon (HCT116) 21851957
chr19 13951887 13954603 TCF7L2 GTRD no Colon (HCT116) 108390136
chr19 13951893 13954672 TCF7L2 GTRD no Colon (HCT116) 21851961
chr19 13951893 13954672 TCF7L2 GTRD no Colon (HCT116) 108390137
chr19 13951917 13953672 ZNF274 GTRD no Bone Marrow (K562) 21851968
chr19 13951936 13954470 TCF7L2 GTRD no Colon (HCT116) 21851976
chr19 13951936 13954470 TCF7L2 GTRD no Colon (HCT116) 108390138
chr19 13952028 13953951 ZNF274 GTRD no Bone Marrow (K562) 21852006
chr19 13952122 13953921 ZNF143 GTRD no Epithelial (MCF-7) 21852032
chr19 13952455 13953659 ZNF274 GTRD no Bone Marrow (K562) 21852075
chr19 13952798 13953844 ZNF274 GTRD no Bone Marrow (K562) 21852080
chr19 13952866 13954773 ZNF143 GTRD no Epithelial (MCF-7) 21852081
chr19 13952866 13954773 ZNF143 GTRD no Epithelial (MCF-7) 108390139
chr19 13952867 13953989 AR GTRD no Prostate (PC-3) 21852082
chr19 13952874 13953951 ZNF274 GTRD no Bone Marrow (K562) 21852083
chr19 13952879 13954270 ZNF274 GTRD no Blood (GM12878) 21852084
chr19 13952881 13954705 ZNF143 GTRD no Epithelial (MCF-7) 21852085
chr19 13952881 13954705 ZNF143 GTRD no Epithelial (MCF-7) 108390140
chr19 13952890 13954784 ZNF143 GTRD no Epithelial (MCF-7) 21852086
chr19 13952890 13954784 ZNF143 GTRD no Epithelial (MCF-7) 108390141
chr19 13952897 13953712 ZNF274 GTRD no Bone Marrow (K562) 21852087
chr19 13952912 13953712 ZNF274 GTRD no Bone Marrow (K562) 21852090
chr19 13952920 13953805 ZNF274 GTRD no Bone Marrow (K562) 21852092
chr19 13952925 13953588 ZNF274 GTRD no Bone Marrow (K562) 21852093
chr19 13952929 13953922 ZNF274 GTRD no Bone Marrow (K562) 21852094
chr19 13952950 13953796 ZNF274 GTRD no Bone Marrow (K562) 21852097
chr19 13952962 13953618 ZNF274 GTRD no Bone Marrow (K562) 21852098
chr19 13952977 13953914 ZNF274 GTRD no Cervix (HeLa-S3) 21852099
chr19 13952978 13953908 ZNF143 GTRD no Epithelial (MCF-7) 21852100
chr19 13952979 13953854 ZNF143 GTRD no Epithelial (MCF-7) 21852101
chr19 13952984 13953742 ZNF274 GTRD no Bone Marrow (K562) 21852102
chr19 13952986 13953612 ZBTB33 GTRD no Brain (SK-N-SH) 21852103
chr19 13952990 13953665 ZNF274 GTRD no Bone Marrow (K562) 21852104
chr19 13953023 13953842 ZNF274 GTRD no Blood (GM12878) 21852106
chr19 13953024 13954807 ZNF143 GTRD no Epithelial (MCF-7) 21852107
chr19 13953024 13954807 ZNF143 GTRD no Epithelial (MCF-7) 108390142
chr19 13953032 13953556 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852108
chr19 13953058 13953624 ZNF274 GTRD no Bone Marrow (K562) 21852109
chr19 13953070 13953603 ZNF274 GTRD no Blood (GM12878) 21852111
chr19 13953084 13953707 ZNF274 GTRD no Bone Marrow (K562) 21852112
chr19 13953093 13953644 ZNF143 GTRD no Epithelial (MCF-7) 21852113
chr19 13953093 13954226 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852114
chr19 13953099 13953823 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852115
chr19 13953103 13953730 ZNF143 GTRD no Epithelial (MCF-7) 21852116
chr19 13953115 13953669 ZNF143 GTRD no Epithelial (MCF-7) 21852117
chr19 13953142 13953662 ZBTB33 GTRD no Brain (SK-N-SH) 21852118
chr19 13953153 13953646 ZNF274 GTRD no Blood (GM12878) 21852120
chr19 13953155 13953644 ZNF274 GTRD no Blood (GM12878) 21852121
chr19 13953155 13953683 ZNF143 GTRD no Epithelial (MCF-7) 21852122
chr19 13953160 13953566 ZNF274 GTRD no Bone Marrow (K562) 21852123
chr19 13953165 13953629 ZNF274 GTRD no Cervix (HeLa-S3) 21852124
chr19 13953168 13953588 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852126
chr19 13953177 13953600 ZNF143 GTRD no Epithelial (MCF-7) 21852128
chr19 13953182 13953618 ZNF274 GTRD no Cervix (HeLa-S3) 21852129
chr19 13953207 13953643 ZNF274 GTRD no Liver (HepG2) 21852131
chr19 13953210 13953690 ZNF274 GTRD no Bone Marrow (K562) 21852132
chr19 13953214 13953596 ZNF274 GTRD no Bone Marrow (K562) 21852133
chr19 13953232 13953599 ZNF274 GTRD no Liver (HepG2) 21852134
chr19 13953236 13953727 CTCF GTRD no Lung 21852136
chr19 13953255 13953625 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852140
chr19 13953259 13953669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852141
chr19 13953261 13953779 ZNF274 GTRD no Bone Marrow (K562) 21852142
chr19 13953283 13953822 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852143
chr19 13953284 13953780 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852144
chr19 13953288 13953724 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852146
chr19 13953293 13953749 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852147
chr19 13953299 13953875 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852148
chr19 13953307 13953687 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852151
chr19 13953326 13953690 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852154
chr19 13953340 13953776 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852155
chr19 13953345 13953669 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852156
chr19 13953362 13953555 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852157
chr19 13953371 13953887 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852158
chr19 13953380 13953910 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852159
chr19 13953383 13953947 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852160
chr19 13953405 13953568 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852161
chr19 13953420 13953680 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852162
chr19 13953427 13953829 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852163
chr19 13953442 13953966 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852164
chr19 13953450 13953849 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21852165
chr19 13953453 13953953 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852166
chr19 13953456 13953741 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852167
chr19 13953486 13953876 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852168
chr19 13953509 13953973 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852169
chr19 13953524 13953839 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852170
chr19 13953525 13953929 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852171
chr19 13953526 13953866 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21852172
chr19 13953528 13953541 TFAP2A JASPAR yes 112537078
chr19 13953528 13953541 TFAP2C JASPAR yes 112537079
Genes associated with rs565239901[chr19:13953537], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More