EnhancerDB
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  3. rs565301899[chr12:56443080]
Enhancers that have rs565301899[chr12:56443080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 56438391 56456078 enh2386
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs565301899[chr12:56443080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 56442837 56443688 ZNF274 GTRD no Cervix (HeLa-S3) 21550946
chr12 56442975 56443553 ZNF274 GTRD no Cervix (HeLa-S3) 21550947
chr12 56443069 56443084 FOXP1 JASPAR yes 121087723
chr12 56443071 56443092 ZNF263 JASPAR yes 121087724
chr12 56443072 56443093 IRF1 JASPAR yes 121087725
chr12 56443073 56443088 FOXP1 JASPAR yes 121087726
chr12 56443076 56443090 SPIC JASPAR yes 121087727
chr12 56443076 56443090 STAT1 JASPAR yes 121087728
chr12 56443076 56443091 PRDM1 JASPAR yes 121087729
chr12 56443076 56443091 STAT2 JASPAR yes 121087730
chr12 56443076 56443097 IRF1 JASPAR yes 121087731
chr12 56443078 56443099 IRF1 JASPAR yes 121087732
chr12 56443079 56443100 ZNF263 JASPAR yes 121087733
chr12 56443080 56443101 ZNF263 JASPAR yes 121087734
Genes associated with rs565301899[chr12:56443080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More