EnhancerDB
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  3. rs565392758[chr12:124962121]
Enhancers that have rs565392758[chr12:124962121]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs565392758[chr12:124962121]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124961493 124962177 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21580849
chr12 124961493 124962177 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068722
chr12 124961558 124962154 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21580850
chr12 124961558 124962154 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068723
chr12 124961619 124962288 ZNF274 GTRD no Cervix (HeLa-S3) 21580852
chr12 124961619 124962288 ZNF274 GTRD no Cervix (HeLa-S3) 108068725
chr12 124961624 124962144 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21580853
chr12 124961624 124962144 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068726
chr12 124961667 124962262 ZNF143 GTRD no Epithelial (MCF-7) 21580854
chr12 124961667 124962262 ZNF143 GTRD no Epithelial (MCF-7) 108068727
chr12 124961677 124962294 ZNF274 GTRD no Blood (GM12878) 21580856
chr12 124961677 124962294 ZNF274 GTRD no Blood (GM12878) 108068729
chr12 124961683 124962294 ZNF274 GTRD no Blood (GM12878) 21580857
chr12 124961683 124962294 ZNF274 GTRD no Blood (GM12878) 108068730
chr12 124961705 124962190 ZNF143 GTRD no Epithelial (MCF-7) 21580859
chr12 124961705 124962190 ZNF143 GTRD no Epithelial (MCF-7) 108068732
chr12 124961740 124962163 ZNF274 GTRD no Bone Marrow (K562) 21580860
chr12 124961740 124962163 ZNF274 GTRD no Bone Marrow (K562) 108068733
chr12 124961744 124962150 ZNF274 GTRD no Blood (GM12878) 21580862
chr12 124961744 124962150 ZNF274 GTRD no Blood (GM12878) 108068735
chr12 124962108 124962124 SOX4 JASPAR yes 124382605
Genes associated with rs565392758[chr12:124962121], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More