EnhancerDB
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  3. rs565438404[chr5:90606275]
Enhancers that have rs565438404[chr5:90606275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565438404[chr5:90606275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90606269 90606280 USF1 JASPAR yes 64191362
chr5 90606270 90606280 MAX JASPAR yes 64191363
chr5 90606274 90606288 NR2F1 JASPAR yes 64191364
Genes associated with rs565438404[chr5:90606275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More