EnhancerDB
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  3. rs565442458[chr12:46791081]
Enhancers that have rs565442458[chr12:46791081]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46774225 46791355 enh14675
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565442458[chr12:46791081]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46791078 46791088 GBX2 JASPAR yes 120615479
chr12 46791078 46791088 MNX1 JASPAR yes 120615480
chr12 46791078 46791088 RAX JASPAR yes 120615481
chr12 46791078 46791093 HNF1A JASPAR yes 120615482
chr12 46791079 46791087 BARX1 JASPAR yes 120615483
chr12 46791079 46791087 BSX JASPAR yes 120615484
chr12 46791079 46791087 ISL2 JASPAR yes 120615485
chr12 46791079 46791087 LMX1B JASPAR yes 120615486
chr12 46791079 46791087 MSX1 JASPAR yes 120615487
chr12 46791079 46791087 MSX2 JASPAR yes 120615488
chr12 46791079 46791092 HNF1B JASPAR yes 120615489
chr12 46791079 46791095 POU4F2 JASPAR yes 120615490
chr12 46791079 46791095 POU4F3 JASPAR yes 120615491
chr12 46791080 46791090 PAX3 JASPAR yes 120615492
chr12 46791080 46791090 PAX7 JASPAR yes 120615493
chr12 46791081 46791095 POU4F1 JASPAR yes 120615494
chr12 46791081 46791096 HNF1A JASPAR yes 120615495
Genes associated with rs565442458[chr12:46791081], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More