EnhancerDB
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  3. rs565593462[chr1:27849835]
Enhancers that have rs565593462[chr1:27849835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27840205 27858326 enh176
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565593462[chr1:27849835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27849822 27849841 REST JASPAR yes 27704718
chr1 27849824 27849836 TFAP2A JASPAR yes 27704719
chr1 27849825 27849836 TFAP2A JASPAR yes 27704720
chr1 27849826 27849835 TFAP2A JASPAR yes 27704721
chr1 27849830 27849836 SP1 TRANSFAC yes 27704722
chr1 27849831 27849836 SP1 TRANSFAC yes 27704723
chr1 27849831 27849842 E2F4 JASPAR yes 27704724
chr1 27849832 27849837 SP1 TRANSFAC yes 27704725
chr1 27849832 27849838 SP1 TRANSFAC yes 27704726
Genes associated with rs565593462[chr1:27849835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More