EnhancerDB
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  3. rs565595796[chr1:209586840]
Enhancers that have rs565595796[chr1:209586840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs565595796[chr1:209586840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209585538 209588619 ZBTB33 GTRD no Brain (SK-N-SH) 107865749
chr1 209586824 209586845 IRF1 JASPAR yes 34973443
chr1 209586826 209586841 PRDM1 JASPAR yes 34973444
chr1 209586826 209586841 STAT2 JASPAR yes 34973445
chr1 209586828 209586849 IRF1 JASPAR yes 34973446
chr1 209586829 209586844 FOXP1 JASPAR yes 34973447
chr1 209586829 209586850 IRF1 JASPAR yes 34973448
chr1 209586830 209586845 FOXP1 JASPAR yes 34973449
chr1 209586830 209586851 IRF1 JASPAR yes 34973450
chr1 209586834 209586855 IRF1 JASPAR yes 34973451
chr1 209586835 209586850 FOXP1 JASPAR yes 34973452
chr1 209586835 209586856 IRF1 JASPAR yes 34973453
chr1 209586837 209586852 FOXP1 JASPAR yes 34973454
chr1 209586839 209586854 FOXP1 JASPAR yes 34973455
chr1 209586840 209586855 FOXP1 JASPAR yes 34973456
Genes associated with rs565595796[chr1:209586840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More