EnhancerDB
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Enhancers that have rs565654[chr6:33569757]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs565654[chr6:33569757]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33569742 33569757 MEF2A JASPAR yes 101159589
chr6 33569746 33569760 POU4F1 JASPAR yes 101159591
chr6 33569746 33569762 POU4F2 JASPAR yes 101159592
chr6 33569746 33569762 POU4F3 JASPAR yes 101159593
chr6 33569749 33569764 HNF1A JASPAR yes 101159594
chr6 33569750 33569763 HNF1B JASPAR yes 101159595
chr6 33569750 33569764 ONECUT1 JASPAR yes 101159596
chr6 33569750 33569764 ONECUT2 JASPAR yes 101159597
chr6 33569750 33569764 ONECUT3 JASPAR yes 101159598
chr6 33569751 33569761 CUX1 JASPAR yes 101159599
chr6 33569751 33569761 CUX2 JASPAR yes 101159600
chr6 33569751 33569761 PAX3 JASPAR yes 101159601
chr6 33569751 33569761 PAX7 JASPAR yes 101159602
chr6 33569754 33569768 POU4F1 JASPAR yes 101159603
chr6 33569754 33569770 POU4F2 JASPAR yes 101159604
chr6 33569754 33569770 POU4F3 JASPAR yes 101159605
chr6 33569755 33569765 PAX3 JASPAR yes 101159606
chr6 33569755 33569765 PAX7 JASPAR yes 101159607
chr6 33569756 33569770 POU4F1 JASPAR yes 101159608
chr6 33569756 33569771 HNF1A JASPAR yes 101159609
chr6 33569757 33569767 GSX1 JASPAR yes 101159610
chr6 33569757 33569767 GSX2 JASPAR yes 101159611
chr6 33569757 33569767 LHX2 JASPAR yes 101159612
chr6 33569757 33569767 LHX6 JASPAR yes 101159613
chr6 33569757 33569767 MNX1 JASPAR yes 101159614
chr6 33569757 33569767 NOTO JASPAR yes 101159615
chr6 33569757 33569767 POU6F1 JASPAR yes 101159616
chr6 33569757 33569767 RAX JASPAR yes 101159617
Genes associated with rs565654[chr6:33569757], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More