EnhancerDB
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  3. rs565887380[chr17:55487238]
Enhancers that have rs565887380[chr17:55487238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565887380[chr17:55487238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55487234 55487239 SP1 TRANSFAC yes 54952002
chr17 55487234 55487243 HIC2 JASPAR yes 54952003
chr17 55487237 55487241 LFA1 TRANSFAC yes 54952004
chr17 55487238 55487248 ID4 JASPAR yes 54952005
chr17 55487238 55487248 TCF3 JASPAR yes 54952006
chr17 55487238 55487248 TCF4 JASPAR yes 54952007
Genes associated with rs565887380[chr17:55487238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More