EnhancerDB
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  3. rs565907039[chr16:85545134]
Enhancers that have rs565907039[chr16:85545134]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565907039[chr16:85545134]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85543387 85545416 ZNF143 GTRD no Epithelial (MCF-7) 21726673
chr16 85543839 85545295 ZNF274 GTRD no Bone Marrow (K562) 21726674
chr16 85543943 85545299 TCF7L2 GTRD no Colon (HCT116) 21726675
chr16 85544595 85545483 ZNF274 GTRD no Bone Marrow (K562) 21726677
chr16 85544907 85545854 ZNF143 GTRD no Epithelial (MCF-7) 21726679
chr16 85544936 85545656 ZNF274 GTRD no Bone Marrow (K562) 21726680
chr16 85544996 85545838 ZNF274 GTRD no Bone Marrow (K562) 21726681
chr16 85545111 85545602 ZNF274 GTRD no Bone Marrow (K562) 21726682
chr16 85545131 85545146 FOXP1 JASPAR yes 12070093
chr16 85545132 85545147 FOXP1 JASPAR yes 12070094
chr16 85545133 85545148 FOXP1 JASPAR yes 12070095
chr16 85545133 85545154 IRF1 JASPAR yes 12070096
chr16 85545134 85545149 FOXP1 JASPAR yes 12070097
chr16 85545134 85545155 IRF1 JASPAR yes 12070098
Genes associated with rs565907039[chr16:85545134], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More