EnhancerDB
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  3. rs565908769[chr12:65018895]
Enhancers that have rs565908769[chr12:65018895]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs565908769[chr12:65018895]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65018855 65019371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21552815
chr12 65018855 65019371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108041801
chr12 65018878 65019414 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21552816
chr12 65018878 65019414 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108041802
chr12 65018879 65019409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21552817
chr12 65018879 65019409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108041803
chr12 65018885 65018896 FLI1 JASPAR yes 121417364
chr12 65018892 65018902 NFATC3 JASPAR yes 121417366
chr12 65018893 65019537 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21552818
chr12 65018893 65019537 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108041804
chr12 65018895 65018909 RORA JASPAR yes 121417367
Genes associated with rs565908769[chr12:65018895], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More