EnhancerDB
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  3. rs565960400[chr16:89540886]
Enhancers that have rs565960400[chr16:89540886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs565960400[chr16:89540886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89540869 89540890 IRF1 JASPAR yes 12348350
chr16 89540870 89540891 IRF1 JASPAR yes 12348352
chr16 89540871 89540886 FOXP1 JASPAR yes 12348353
Genes associated with rs565960400[chr16:89540886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More