Enhancers that have rs565979989[chr12:52542661]
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Transcript factors that have rs565979989[chr12:52542661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033122
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033123
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033124
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033125
chr12 52541222 52542932 ZBTB33 GTRD no Lung (A549) 108033207
chr12 52541222 52542932 ZBTB33 GTRD no Lung (A549) 108033208
chr12 52541388 52542783 P63 GTRD no Skin (Keratinocyte) 21546421
chr12 52541388 52542783 P63 GTRD no Skin (Keratinocyte) 108033222
chr12 52541388 52542783 P63 GTRD no Skin (Keratinocyte) 108033223
chr12 52541927 52542754 ZNF274 GTRD no Cervix (HeLa-S3) 21546427
chr12 52541927 52542754 ZNF274 GTRD no Cervix (HeLa-S3) 108033227
chr12 52541931 52542771 ZBTB33 GTRD no Lung (A549) 108033228
chr12 52541979 52542778 P63 GTRD no Skin (Keratinocyte) 21546428
chr12 52541979 52542778 P63 GTRD no Skin (Keratinocyte) 108033229
chr12 52542106 52542663 ZNF143 GTRD no Epithelial (MCF-7) 21546431
chr12 52542106 52542663 ZNF143 GTRD no Epithelial (MCF-7) 108033234
chr12 52542153 52543073 ZBTB33 GTRD no Lung (A549) 108033238
chr12 52542197 52542662 ZNF143 GTRD no Epithelial (MCF-7) 21546437
chr12 52542197 52542662 ZNF143 GTRD no Epithelial (MCF-7) 108033245
chr12 52542253 52542765 ZNF143 GTRD no Epithelial (MCF-7) 21546440
chr12 52542253 52542765 ZNF143 GTRD no Epithelial (MCF-7) 108033249
chr12 52542264 52542768 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546441
chr12 52542264 52542768 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033250
chr12 52542300 52542876 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033251
chr12 52542324 52542912 EP300 UCSC Txn Factor no Conserved 108033253
chr12 52542324 52542912 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033254
chr12 52542350 52542720 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546444
chr12 52542350 52542720 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033256
chr12 52542354 52542818 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546445
chr12 52542354 52542818 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108033257
chr12 52542359 52542853 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033258
chr12 52542363 52542693 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546446
chr12 52542363 52542693 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033259
chr12 52542365 52543015 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546447
chr12 52542365 52543015 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033260
chr12 52542369 52543029 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546448
chr12 52542369 52543029 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033261
chr12 52542384 52543054 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108033265
chr12 52542391 52542767 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546450
chr12 52542391 52542767 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108033266
chr12 52542399 52542809 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033267
chr12 52542411 52542951 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033268
chr12 52542416 52542672 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033269
chr12 52542458 52542942 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033270
chr12 52542464 52542860 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546451
chr12 52542464 52542860 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033271
chr12 52542468 52542748 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033272
chr12 52542469 52543039 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546452
chr12 52542469 52543039 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033273
chr12 52542471 52542855 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546453
chr12 52542471 52542855 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033274
chr12 52542482 52542832 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033275
chr12 52542483 52542900 ESR1 UCSC Txn Factor no Conserved 108033276
chr12 52542569 52543089 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033277
chr12 52542572 52542736 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546454
chr12 52542572 52542736 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033278
chr12 52542650 52542670 ESR1 JASPAR yes 82405792
chr12 52542650 52542670 ESR1 JASPAR yes 120922091
chr12 52542660 52542755 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546455
chr12 52542660 52542755 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033279

Genes associated with rs565979989[chr12:52542661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More