EnhancerDB
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  3. rs566025379[chr12:52612482]
Enhancers that have rs566025379[chr12:52612482]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566025379[chr12:52612482]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52612478 52612499 IRF1 JASPAR yes 120929602
chr12 52612479 52612500 IRF1 JASPAR yes 120929603
chr12 52612481 52612502 IRF1 JASPAR yes 120929604
chr12 52612482 52612503 IRF1 JASPAR yes 120929605
Genes associated with rs566025379[chr12:52612482], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More