EnhancerDB
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  3. rs566089618[chr1:27471579]
Enhancers that have rs566089618[chr1:27471579]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566089618[chr1:27471579]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27471558 27471579 IRF1 JASPAR yes 27681565
chr1 27471559 27471580 IRF1 JASPAR yes 27681567
chr1 27471559 27471580 ZNF263 JASPAR yes 27681568
chr1 27471560 27471581 IRF1 JASPAR yes 27681570
chr1 27471563 27471584 IRF1 JASPAR yes 27681573
chr1 27471564 27471579 FOXP1 JASPAR yes 27681574
chr1 27471564 27471585 IRF1 JASPAR yes 27681575
chr1 27471565 27471580 FOXP1 JASPAR yes 27681576
chr1 27471565 27471586 IRF1 JASPAR yes 27681577
chr1 27471566 27471581 FOXP1 JASPAR yes 27681578
chr1 27471566 27471587 IRF1 JASPAR yes 27681579
chr1 27471567 27471582 FOXP1 JASPAR yes 27681580
chr1 27471569 27471584 FOXP1 JASPAR yes 27681581
chr1 27471570 27471591 IRF1 JASPAR yes 27681582
chr1 27471571 27471586 FOXP1 JASPAR yes 27681583
chr1 27471572 27471587 IRF9 JASPAR yes 27681584
chr1 27471574 27471588 SPIC JASPAR yes 27681585
chr1 27471574 27471588 STAT1 JASPAR yes 27681586
chr1 27471574 27471589 PRDM1 JASPAR yes 27681587
chr1 27471574 27471589 STAT2 JASPAR yes 27681588
chr1 27471579 27471593 IRF7 JASPAR yes 27681589
Genes associated with rs566089618[chr1:27471579], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More