EnhancerDB
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  3. rs566116994[chr17:55622671]
Enhancers that have rs566116994[chr17:55622671]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566116994[chr17:55622671]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55622656 55622671 STAT2 JASPAR yes 54967348
chr17 55622669 55622679 BHLHE22 JASPAR yes 54967349
chr17 55622669 55622679 NEUROD2 JASPAR yes 54967350
chr17 55622669 55622679 OLIG2 JASPAR yes 54967351
chr17 55622669 55622679 OLIG3 JASPAR yes 54967352
Genes associated with rs566116994[chr17:55622671], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More