EnhancerDB
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  3. rs566146623[chr5:78046857]
Enhancers that have rs566146623[chr5:78046857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs566146623[chr5:78046857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78046851 78046872 IRF1 JASPAR yes 63621384
chr5 78046852 78046873 IRF1 JASPAR yes 63621385
chr5 78046856 78046871 FOXP1 JASPAR yes 63621386
chr5 78046857 78046872 FOXP1 JASPAR yes 63621387
Genes associated with rs566146623[chr5:78046857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More