EnhancerDB
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  3. rs566153648[chr12:123608538]
Enhancers that have rs566153648[chr12:123608538]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123594465 123621595 enh15080
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs566153648[chr12:123608538]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123608531 123608544 SMAD2 JASPAR yes 124321043
chr12 123608534 123608544 TBR1 JASPAR yes 124321044
chr12 123608535 123608545 TBX21 JASPAR yes 124321045
chr12 123608536 123608544 MGA JASPAR yes 124321046
chr12 123608536 123608544 TBX15 JASPAR yes 124321047
chr12 123608536 123608544 TBX1 JASPAR yes 124321048
chr12 123608536 123608544 TBX4 JASPAR yes 124321049
chr12 123608536 123608544 TBX5 JASPAR yes 124321050
chr12 123608536 123608545 ZEB1 JASPAR yes 124321051
chr12 123608536 123608548 PKNOX1 JASPAR yes 124321052
chr12 123608536 123608548 TGIF1 JASPAR yes 124321053
chr12 123608536 123608549 ZBTB18 JASPAR yes 124321054
chr12 123608537 123608547 FIGLA JASPAR yes 124321055
chr12 123608537 123608547 ID4 JASPAR yes 124321056
chr12 123608537 123608547 TCF3 JASPAR yes 124321057
chr12 123608537 123608547 TCF4 JASPAR yes 124321058
chr12 123608538 123608547 SNAI2 JASPAR yes 124321059
Genes associated with rs566153648[chr12:123608538], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More