EnhancerDB
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  3. rs566156775[chr1:27918375]
Enhancers that have rs566156775[chr1:27918375]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs566156775[chr1:27918375]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27918372 27918382 NFIA JASPAR yes 27713401
chr1 27918373 27918382 NFIX JASPAR yes 27713402
chr1 27918374 27918380 NFIC JASPAR yes 27713403
chr1 27918374 27918388 TLX1 JASPAR yes 27713404
chr1 27918375 27918389 TLX1 JASPAR yes 27713405
Genes associated with rs566156775[chr1:27918375], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More