EnhancerDB
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  3. rs566160948[chr1:153500835]
Enhancers that have rs566160948[chr1:153500835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566160948[chr1:153500835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153500639 153500882 ZNF143 GTRD no Epithelial (MCF-7) 21339720
chr1 153500831 153500841 ID4 JASPAR yes 32257620
chr1 153500831 153500841 TCF3 JASPAR yes 32257621
chr1 153500831 153500841 TCF4 JASPAR yes 32257622
chr1 153500832 153500841 SNAI2 JASPAR yes 32257623
chr1 153500833 153500838 USF2 TRANSFAC yes 32257624
Genes associated with rs566160948[chr1:153500835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More