EnhancerDB
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  3. rs566209935[chr6:12353503]
Enhancers that have rs566209935[chr6:12353503]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs566209935[chr6:12353503]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12353485 12353506 IRF1 JASPAR yes 99964935
chr6 12353486 12353506 RREB1 JASPAR yes 99964936
chr6 12353489 12353503 IRF7 JASPAR yes 99964940
chr6 12353489 12353504 IRF9 JASPAR yes 99964941
chr6 12353491 12353506 FOXP1 JASPAR yes 99964943
chr6 12353498 12353504 TCF4 TRANSFAC yes 99964944
chr6 12353498 12353513 FOXP1 JASPAR yes 99964945
chr6 12353502 12353519 BCL6B JASPAR yes 99964946
Genes associated with rs566209935[chr6:12353503], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More