EnhancerDB
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Enhancers that have rs566250701[chr1:203489996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566250701[chr1:203489996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203489680 203490010 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369211
chr1 203489680 203490010 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859012
chr1 203489759 203490008 TCF7L2 GTRD no Colon (HCT116) 21369212
chr1 203489937 203490308 ZNF143 GTRD no Epithelial (MCF-7) 21369213
Genes associated with rs566250701[chr1:203489996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More