EnhancerDB
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  3. rs566254087[chr1:110337246]
Enhancers that have rs566254087[chr1:110337246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110323180 110341767 enh12126
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 110336950 110337403 vista2869
VISTA
Transcript factors that have rs566254087[chr1:110337246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110335612 110337414 ZNF274 GTRD no Bone Marrow (K562) 21327280
chr1 110335612 110337414 ZNF274 GTRD no Bone Marrow (K562) 107819629
chr1 110335612 110337414 ZNF274 GTRD no Bone Marrow (K562) 107819630
chr1 110335762 110340839 ZNF274 GTRD no Cervix (HeLa-S3) 21327281
chr1 110335762 110340839 ZNF274 GTRD no Cervix (HeLa-S3) 107819631
chr1 110335762 110340839 ZNF274 GTRD no Cervix (HeLa-S3) 107819632
chr1 110335762 110340839 ZNF274 GTRD no Cervix (HeLa-S3) 107819633
chr1 110335928 110342180 ZNF274 GTRD no Bone Marrow (K562) 21327289
chr1 110335928 110342180 ZNF274 GTRD no Bone Marrow (K562) 107819644
chr1 110335928 110342180 ZNF274 GTRD no Bone Marrow (K562) 107819645
chr1 110335928 110342180 ZNF274 GTRD no Bone Marrow (K562) 107819646
chr1 110336022 110342413 ZNF274 GTRD no Bone Marrow (K562) 21327292
chr1 110336022 110342413 ZNF274 GTRD no Bone Marrow (K562) 107819650
chr1 110336022 110342413 ZNF274 GTRD no Bone Marrow (K562) 107819651
chr1 110336022 110342413 ZNF274 GTRD no Bone Marrow (K562) 107819652
chr1 110336045 110339673 ZNF274 GTRD no Cervix (HeLa-S3) 21327293
chr1 110336045 110339673 ZNF274 GTRD no Cervix (HeLa-S3) 107819653
chr1 110336045 110339673 ZNF274 GTRD no Cervix (HeLa-S3) 107819654
chr1 110336058 110340812 ZNF274 GTRD no Bone Marrow (K562) 21327295
chr1 110336058 110340812 ZNF274 GTRD no Bone Marrow (K562) 107819656
chr1 110336058 110340812 ZNF274 GTRD no Bone Marrow (K562) 107819657
chr1 110336082 110339846 ZBTB33 GTRD no Brain (SK-N-SH) 21327296
chr1 110336082 110339846 ZBTB33 GTRD no Brain (SK-N-SH) 107819658
chr1 110336082 110339846 ZBTB33 GTRD no Brain (SK-N-SH) 107819659
chr1 110336094 110337312 TCF7L2 GTRD no Colon (HCT116) 21327297
chr1 110336094 110337312 TCF7L2 GTRD no Colon (HCT116) 107819660
chr1 110336124 110337269 ZBTB33 GTRD no Brain (SK-N-SH) 21327300
chr1 110336124 110337269 ZBTB33 GTRD no Brain (SK-N-SH) 107819663
chr1 110336128 110341641 ZNF274 GTRD no Bone Marrow (K562) 21327302
chr1 110336128 110341641 ZNF274 GTRD no Bone Marrow (K562) 107819664
chr1 110336128 110341641 ZNF274 GTRD no Bone Marrow (K562) 107819665
chr1 110336168 110344309 ZNF274 GTRD no Bone Marrow (K562) 21327308
chr1 110336168 110344309 ZNF274 GTRD no Bone Marrow (K562) 107819670
chr1 110336168 110344309 ZNF274 GTRD no Bone Marrow (K562) 107819671
chr1 110336182 110337278 ZBTB33 GTRD no Brain (SK-N-SH) 21327309
chr1 110336182 110337278 ZBTB33 GTRD no Brain (SK-N-SH) 107819672
chr1 110336211 110342448 ZNF274 GTRD no Bone Marrow (K562) 21327314
chr1 110336211 110342448 ZNF274 GTRD no Bone Marrow (K562) 107819676
chr1 110336211 110342448 ZNF274 GTRD no Bone Marrow (K562) 107819677
chr1 110336241 110340038 ZNF274 GTRD no Cervix (HeLa-S3) 21327317
chr1 110336241 110340038 ZNF274 GTRD no Cervix (HeLa-S3) 107819680
chr1 110336241 110340038 ZNF274 GTRD no Cervix (HeLa-S3) 107819681
chr1 110336309 110339254 ZNF274 GTRD no Bone Marrow (K562) 21327325
chr1 110336309 110339254 ZNF274 GTRD no Bone Marrow (K562) 107819689
chr1 110336816 110342225 ZNF274 GTRD no Blood (GM12878) 107819700
chr1 110336816 110342225 ZNF274 GTRD no Blood (GM12878) 107819701
chr1 110337068 110337554 POLR2A UCSC Txn Factor no Conserved 107819704
chr1 110337134 110337658 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21327350
chr1 110337134 110337658 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107819705
chr1 110337179 110341844 ZNF274 GTRD no Blood (GM12878) 107819706
chr1 110337179 110341844 ZNF274 GTRD no Blood (GM12878) 107819707
chr1 110337185 110341425 ZNF274 GTRD no Blood (GM12878) 107819708
chr1 110337185 110341425 ZNF274 GTRD no Blood (GM12878) 107819709
chr1 110337187 110340256 ZNF274 GTRD no Bone Marrow (K562) 21327351
chr1 110337187 110340256 ZNF274 GTRD no Bone Marrow (K562) 107819710
chr1 110337187 110340256 ZNF274 GTRD no Bone Marrow (K562) 107819711
chr1 110337191 110340564 ZNF274 GTRD no Bone Marrow (K562) 21327352
chr1 110337191 110340564 ZNF274 GTRD no Bone Marrow (K562) 107819712
chr1 110337191 110340564 ZNF274 GTRD no Bone Marrow (K562) 107819713
chr1 110337195 110340261 ZNF274 GTRD no Bone Marrow (K562) 21327353
chr1 110337195 110340261 ZNF274 GTRD no Bone Marrow (K562) 107819714
chr1 110337195 110340261 ZNF274 GTRD no Bone Marrow (K562) 107819715
chr1 110337198 110340666 ZNF274 GTRD no Liver (HepG2) 21327354
chr1 110337198 110340666 ZNF274 GTRD no Liver (HepG2) 107819716
chr1 110337198 110340666 ZNF274 GTRD no Liver (HepG2) 107819717
chr1 110337210 110340460 ZNF274 GTRD no Blood (GM12878) 107819718
chr1 110337210 110340460 ZNF274 GTRD no Blood (GM12878) 107819719
chr1 110337215 110340743 ZNF274 GTRD no Blood (GM12878) 107819720
chr1 110337215 110340743 ZNF274 GTRD no Blood (GM12878) 107819721
chr1 110337229 110340337 ZNF274 GTRD no Cervix (HeLa-S3) 21327355
chr1 110337229 110340337 ZNF274 GTRD no Cervix (HeLa-S3) 107819722
chr1 110337229 110340337 ZNF274 GTRD no Cervix (HeLa-S3) 107819723
chr1 110337233 110337249 RFX5 JASPAR yes 31439323
chr1 110337233 110337249 RFX5 JASPAR yes 118347617
chr1 110337234 110337253 RFX2 JASPAR yes 31439324
chr1 110337234 110337253 RFX2 JASPAR yes 118347618
chr1 110337234 110340398 TCF7L2 GTRD no Colon (HCT116) 21327356
chr1 110337234 110340398 TCF7L2 GTRD no Colon (HCT116) 107819724
chr1 110337234 110340398 TCF7L2 GTRD no Colon (HCT116) 107819725
chr1 110337243 110337258 RUNX2 JASPAR yes 31439326
chr1 110337243 110337258 RUNX2 JASPAR yes 118347620
Genes associated with rs566254087[chr1:110337246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More