EnhancerDB
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  3. rs566260414[chr1:27042706]
Enhancers that have rs566260414[chr1:27042706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27041525 27053715 enh11655
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566260414[chr1:27042706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27042691 27042706 FOXP1 JASPAR yes 27652160
chr1 27042692 27042707 FOXP1 JASPAR yes 27652161
chr1 27042693 27042708 FOXP1 JASPAR yes 27652162
chr1 27042693 27042714 IRF1 JASPAR yes 27652163
chr1 27042694 27042709 FOXP1 JASPAR yes 27652164
chr1 27042694 27042715 IRF1 JASPAR yes 27652165
chr1 27042695 27042710 FOXP1 JASPAR yes 27652166
chr1 27042695 27042716 IRF1 JASPAR yes 27652167
chr1 27042696 27042711 FOXP1 JASPAR yes 27652168
chr1 27042696 27042717 IRF1 JASPAR yes 27652169
chr1 27042697 27042712 FOXP1 JASPAR yes 27652170
chr1 27042699 27042714 FOXP1 JASPAR yes 27652171
chr1 27042700 27042721 IRF1 JASPAR yes 27652172
chr1 27042701 27042716 FOXP1 JASPAR yes 27652173
chr1 27042701 27042722 IRF1 JASPAR yes 27652174
chr1 27042702 27042723 IRF1 JASPAR yes 27652175
chr1 27042706 27042721 PRDM1 JASPAR yes 27652176
chr1 27042706 27042727 IRF1 JASPAR yes 27652177
Genes associated with rs566260414[chr1:27042706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More