EnhancerDB
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  3. rs566329978[chr5:14232419]
Enhancers that have rs566329978[chr5:14232419]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14197965 14242825 enh22053
Brain (SK-N-MC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566329978[chr5:14232419]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14232409 14232429 RREB1 JASPAR yes 61027272
chr5 14232416 14232428 E2F8 JASPAR yes 61027273
chr5 14232416 14232436 RREB1 JASPAR yes 61027274
chr5 14232417 14232427 ZNF740 JASPAR yes 61027275
chr5 14232419 14232433 PLAG1 JASPAR yes 61027276
Genes associated with rs566329978[chr5:14232419], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More